Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864612.1_cds_XP_016516051.1_28334
CDS Infomation

[gene=LOC107832698] [db_xref=GeneID:107832698] [protein=uncharacterized protein LOC107832698] [protein_id=XP_016516051.1] [location=join(25862..26404,28054..28923,29856..30311,30939..31128,31214..32136)] [gbkey=CDS]
Sequence

ATGGCGTCTCTCTTCAGAGACCGTACTTTAGGCTATTCCCGTAGGGACTCCACCGGCGCC
GCCGCTATCGCCGCCGTATCCACCACCAGCAGCTGCCGGTACTCAACTTCCAGCAGCTCT
GCCGCCTTATCTCCACTCCCATCACCATTCTCCGACCTAACTCCGTCACTCTCCGCCTCC
GACCTCTGTGAAACAGCCTACGAGATCTTCGTAGCTTCTTGCCGTACTTCCACCGGAAAA
GCCTTAACCTACATTCCCGCCGACCGATCTCCGTCACCGTCGCCGTCGAATTCCAATTCG
TCTTCATCTTCACCTTCTATGCAGAGATCTCTTACTTCTACTGCTGCTTCTAAGATGAAG
AAAGCTCTGGGCCTTCGATCTAGCTCTAGCTCGGGCATTAAGCGGGCGGAGGGGAGTCCG
GGCTCCGGTGGAAAGCCCAAGAAGCCCGTAACTGTAGGGGAGCTTATGAGGGTTCAAATG
AAGGTCTCTGAGAGTGTTGATTCCAGAATTCGTAGAGCCCTTTTGAGAATTGCTGCTGGC
CAGGTTGGAAGAAGAATTGAGTCAACAGTTCTCCCACTGGAGCTCTTACAGCAGTTCAAA
GCTGCAGATTTTACTGATCAGAGAGAGTACGATGCGTGGCAGAAAAGAAATCTAAAAATG
CTCGAGGCTGGACTTCTTTTACATCCACACATGCCACTGGATAAGTCGAATACTGCTGCG
CAGAGGCTGCGGCAAATTATTCAAGCTGCCTTAGACCGTCCAATAGAAACAGGGAGAAAC
AATGAGTCAATGCAAGTTCTCCGAACAGCTGTAATGACTCTTGCTAATAGGTCACCTGAT
GGATCTCTTTTTGAATCATGCCACTGGGCTGACGGTTTCCCTTTGAACCTCAGACTCTAT
GAGATACTTCTGGAGGCATGCTTTGATGTAAATGATGAAGCGTCCATCATAGAGGAAGTT
GATGAACTTATGGATCTCATAAAGAAAACTTGGGGAATTCTCGGACTTAATCAAATGCTT
CACAATATTTGCTTTTCGTGGGTTTTATTTAACCGTTATGTTGCAACTGGACAAGTTGAG
AATGATCTGTTAGATGCTGCTGATAGTCAGCTAGCTGAAGTCGCAAAAGATGCAAAGACA
ACAAAAGATTCTGCATATGCTAAGATTCTGAATTCTACATTAACAGCAATGTTGGGCTGG
GCTGAGAAAAGGCTCCTTGCATACCATGACACTTTCGATGCCGGGAATATTGAATCAATG
CCAACCATTGTATCTATAGGGGTATCTGCAGCAAAAATTCTTGTTGAAGATATTTCTAAT
GAGTATCGTCGGCGGCGTAAGAGCGAAGTTGATGTGGCTCGGAGTAGAATTGACACTTAC
ATCAGGTCATCACTTCGCACTGCATTTGCTCAGTTAATGGAGAAGGCGGATTCAAGCAGG
AGAGCATCAAGACATCAACCAAATCCTCTTCCTGTCCTTGCCATCCTCGCAAAGGATGTC
GGTGAGCTGGCTTCTAAAGAGAACGAGATTTTTAGTCCCATCTTGAAGAGATGGCATCCT
TTTGCTGCAGGTGTGGCTGTTGCCACCCTACACGTTTGCTACGGGAATGAGCTGAAACAA
TTTGTTTCGGGTATAACGGAATTGACACCAGATGCTGTACAAGTACTGAGAGCAGCAGAT
AAACTGGAGAAAGATCTTGTGCAGATTGCTGTTGAAGATTCAGTGGACAGTGATGATGGT
GGGAAGGCCATTATCCGTGAGATGCCACCATTTGAAGCTGAAGGTGCAATAGGCAACATG
GTGAAAGATTGGATTAAGACAAGAATAGACAGACTCAAGGAATGGGTTGACAGAAATCTC
CAACAAGAGGTCTGGAATCCTCAAGCTAATGAAGGAGGATTTGCCCCCTCTGCTGTTGAA
GTCCTGAGGATTATTGATGAAACTTTAGACGCATTCTTCCAGCTACCGATACCCATGCAT
CCAGCATTGCTCCCAGACTTGATGAGTGGCCTCGATAGATATCTTCAGTATTACGTATCA
AAGGCAAAATCTGGATGTGGATCAAGGAACACATATGTTCCAACCATGCCTGCACTAACC
AGGTGTACGACTGCTACAAAGTTGTGGAAGAAGAAGGATAAGATGCTTAATACGAAGAGG
AACTCACAGGTTGCTACAATGAATGGTGATAACTCATCTGGGGTACTGCAGTTGTGTGTA
CGTATAAATACTTTCCATAGAATTCGGACTGAGGTAGAAGTTCTCGAGAAGAGAATTATT
ACTCTTTTGAGGAATTCTGAATCTGCTCATGTAGAAGACTTTTCAAATGGGTTAGGTAAG
AAGTTTGAAATCTCCCCTGCTGCTTGTATCGAGGGGATCCAACAACTCTCTGAGGCAGTC
GCCTATAGGATTATCTTTCATGATCTAAGTCCTGTTTTATGGGATGGACTGTATATTGGG
GAGCCAGCTTCTTCGCGCATTGAGCCTTTCCTTCAAGAACTCGAAAAGAATCTGACAATC
ATATCAAACACTGTTAATGAAAGAGTCCGGACTCGGATGGTTGCGGACATAATGAGAGCA
TCCTTTGATGGTTTCCTTTTGGTTTTGCTTGCTGGAGGACCTTCTAGGGCTTTCACTCAG
CAGGATTCACAAATTATAGAGGACGATTTCAAGTCCCTCAAAGATGTATTCTGGGCAAAT
GGGGACGGATTGCCCGTGGATGTGATAAACAAATACTCAACAACAGTAAGGGATGTACTT
CCTCTTTTCCGGGCTGATGCAGAGAGCCTCATCGAGCGCTTCAGGCGATCAACTTTGGAA
ACTTATGGTTCATCCGCAAAATCGAGGCTTCCCTTGCCCCCTACATCAGGGCAATGGAAC
CCAACTGAACCAAACACCCTTTTACGTGTCTTGTGCTACCGAAATGATGAAGCTGCTTCC
AAGTTCCTTAAAAAGACTTACAACTTGCCTAAGAAACTGTGA

Peptide Sequence

PEP ID

XP_016516051.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107832698 [Nicotiana tabacum]
Sequence

MASLFRDRTLGYSRRDSTGAAAIAAVSTTSSCRYSTSSSSAALSPLPSPFSDLTPSLSAS
DLCETAYEIFVASCRTSTGKALTYIPADRSPSPSPSNSNSSSSSPSMQRSLTSTAASKMK
KALGLRSSSSSGIKRAEGSPGSGGKPKKPVTVGELMRVQMKVSESVDSRIRRALLRIAAG
QVGRRIESTVLPLELLQQFKAADFTDQREYDAWQKRNLKMLEAGLLLHPHMPLDKSNTAA
QRLRQIIQAALDRPIETGRNNESMQVLRTAVMTLANRSPDGSLFESCHWADGFPLNLRLY
EILLEACFDVNDEASIIEEVDELMDLIKKTWGILGLNQMLHNICFSWVLFNRYVATGQVE
NDLLDAADSQLAEVAKDAKTTKDSAYAKILNSTLTAMLGWAEKRLLAYHDTFDAGNIESM
PTIVSIGVSAAKILVEDISNEYRRRRKSEVDVARSRIDTYIRSSLRTAFAQLMEKADSSR
RASRHQPNPLPVLAILAKDVGELASKENEIFSPILKRWHPFAAGVAVATLHVCYGNELKQ
FVSGITELTPDAVQVLRAADKLEKDLVQIAVEDSVDSDDGGKAIIREMPPFEAEGAIGNM
VKDWIKTRIDRLKEWVDRNLQQEVWNPQANEGGFAPSAVEVLRIIDETLDAFFQLPIPMH
PALLPDLMSGLDRYLQYYVSKAKSGCGSRNTYVPTMPALTRCTTATKLWKKKDKMLNTKR
NSQVATMNGDNSSGVLQLCVRINTFHRIRTEVEVLEKRIITLLRNSESAHVEDFSNGLGK
KFEISPAACIEGIQQLSEAVAYRIIFHDLSPVLWDGLYIGEPASSRIEPFLQELEKNLTI
ISNTVNERVRTRMVADIMRASFDGFLLVLLAGGPSRAFTQQDSQIIEDDFKSLKDVFWAN
GDGLPVDVINKYSTTVRDVLPLFRADAESLIERFRRSTLETYGSSAKSRLPLPPTSGQWN
PTEPNTLLRVLCYRNDEAASKFLKKTYNLPKKL

Transcript Sequence

Gene sequence data has not been registered.